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Relationship: 2810

Title

A descriptive phrase which clearly defines the two KEs being considered and the sequential relationship between them (i.e., which is upstream, and which is downstream). More help

Oxidative Stress leads to Increase, Oxidative DNA damage

Upstream event
The causing Key Event (KE) in a Key Event Relationship (KER). More help
Downstream event
The responding Key Event (KE) in a Key Event Relationship (KER). More help

Key Event Relationship Overview

The utility of AOPs for regulatory application is defined, to a large extent, by the confidence and precision with which they facilitate extrapolation of data measured at low levels of biological organisation to predicted outcomes at higher levels of organisation and the extent to which they can link biological effect measurements to their specific causes.Within the AOP framework, the predictive relationships that facilitate extrapolation are represented by the KERs. Consequently, the overall WoE for an AOP is a reflection in part, of the level of confidence in the underlying series of KERs it encompasses. Therefore, describing the KERs in an AOP involves assembling and organising the types of information and evidence that defines the scientific basis for inferring the probable change in, or state of, a downstream KE from the known or measured state of an upstream KE. More help

AOPs Referencing Relationship

AOP Name Adjacency Weight of Evidence Quantitative Understanding Point of Contact Author Status OECD Status
Deposition of energy leading to occurrence of cataracts adjacent Moderate Low Arthur Author (send email) Open for citation & comment

Taxonomic Applicability

Latin or common names of a species or broader taxonomic grouping (e.g., class, order, family) that help to define the biological applicability domain of the KER.In general, this will be dictated by the more restrictive of the two KEs being linked together by the KER.  More help
Term Scientific Term Evidence Link
human Homo sapiens Moderate NCBI
mouse Mus musculus Moderate NCBI
rat Rattus norvegicus Moderate NCBI
bovine Bos taurus Moderate NCBI

Sex Applicability

An indication of the the relevant sex for this KER. More help
Sex Evidence
Unspecific Moderate

Life Stage Applicability

An indication of the the relevant life stage(s) for this KER.  More help
Term Evidence
All life stages Moderate

Key Event Relationship Description

Provides a concise overview of the information given below as well as addressing details that aren’t inherent in the description of the KEs themselves. More help

Oxidative stress refers to a state in which the amount of reactive oxygen (ROS) and nitrogen (RNS) species overwhelms the cell’s antioxidant defense system. This loss in redox homeostasis can lead to oxidative damage to proteins, lipids, and nucleic acids (Schoenfeld et al., 2012; Tangvarasittichai & Tangvarasittichai, 2018; Turner et al., 2002). As energy is deposited in an aqueous solution, the water molecules undergo radiolysis, breaking bonds to produce ROS (Ahmadi et al., 2021; Karimi et al., 2017). ROS are molecules with oxygen as the functional center and at least one unpaired electron in the outer orbits. Although less common than ROS, RNS can also induce oxidative stress (Cadet et al., 2012; Tangvarasittichai & Tangvarasittichai, 2018).  

Organisms contain a defense system of antioxidants to help manage ROS levels. Antioxidant measures consist of antioxidant enzymes, vitamins and minerals that catalyze the conversion of ROS to non-toxic molecules such as water and O2. When an antioxidant system is overwhelmed by the amount of ROS, the cell can enter a state of oxidative stress (Balasubramanian, 2000; Ganea & Harding, 2006; Karimi et al., 2017).  

Unmanaged oxidative stress can damage vital macromolecules such as DNA leading to oxidative DNA damage. This can be divided into two categories, damage caused by one ROS, and damage caused by at least two ROS associating with the DNA in the space of one to two helix turns. The first scenario initiates DNA-protein cross-links, inter and intrastrand links, and tandem base lesions, while the second scenario produces more complicated lesions, known as oxidatively generated clustered lesions (ODCLs). These can include single and double strand breaks, abasic sites, and oxidized bases (Cadet et al., 2012) which can cause chromosomal aberrations, cytotoxicity, and oncogenic transformations (Stohs, 1995) as well as structural changes to the DNA, such as blocking polymerases (Zhang et al., 2010).  

8-oxo-7,8-dihydro-2’-deoxyguanosine (8-oxodG) lesions are the most common and best-studied, as such they are often used as a marker of oxidative DNA damage (Tangvarasitichai & Tangvarasittichai, 2018). 

Cells possess DNA repair mechanisms that help repair the damage, but these processes are not perfect (Eaton, 1995; Ainsbury et al., 2016; Markkanen, 2017). Furthermore, certain types of lesions, such as DNA double strand breaks, are more complex to repair (Schoenfeld et al, 2012), leading to increased oxidative DNA damage.  

Evidence Collection Strategy

Include a description of the approach for identification and assembly of the evidence base for the KER. For evidence identification, include, for example, a description of the sources and dates of information consulted including expert knowledge, databases searched and associated search terms/strings.  Include also a description of study screening criteria and methodology, study quality assessment considerations, the data extraction strategy and links to any repositories/databases of relevant references.Tabular summaries and links to relevant supporting documentation are encouraged, wherever possible. More help

The strategy for collating the evidence to support the relationship is described in Kozbenko et al 2022. Briefly, a scoping review methodology was used to prioritize studies based on a population, exposure, outcome, endpoint statement.

Evidence Map 2.0

ID Experimental Design Species Upstream Observation Downstream Observation Citation (first author, year) Notes

Evidence Map

Addresses the scientific evidence supporting KERs in an AOP setting the stage for overall assessment of the AOP. More help
Title First Author
Biological Plausibility
Dose Concordance
Temporal Concordance
Incidence Concordance
Biological Plausibility
Dose Concordance Evidence
Temporal Concordance Evidence
Incidence Concordance Evidence
Uncertainties and Inconsistencies
Addresses inconsistencies or uncertainties in the relationship including the identification of experimental details that may explain apparent deviations from the expected patterns of concordance. More help

No evidence. 

Known modulating factors

This table captures specific information on the MF, its properties, how it affects the KER and respective references.1.) What is the modulating factor? Name the factor for which solid evidence exists that it influences this KER. Examples: age, sex, genotype, diet 2.) Details of this modulating factor. Specify which features of this MF are relevant for this KER. Examples: a specific age range or a specific biological age (defined by...); a specific gene mutation or variant, a specific nutrient (deficit or surplus); a sex-specific homone; a certain threshold value (e.g. serum levels of a chemical above...) 3.) Description of how this modulating factor affects this KER. Describe the provable modification of the KER (also quantitatively, if known). Examples: increase or decrease of the magnitude of effect (by a factor of...); change of the time-course of the effect (onset delay by...); alteration of the probability of the effect; increase or decrease of the sensitivity of the downstream effect (by a factor of...) 4.) Provision of supporting scientific evidence for an effect of this MF on this KER. Give a list of references.  More help
Modulating Factor (MF) MF Specification Effect(s) on the KER Reference(s)
Age  Increased age Increased levels of oxidative DNA damage, partly due to decreased antioxidant levels, meaning that the removal of ROS occurs more slowly, increasing the level of oxidative damage. Moreover, in humans, after about forty to fifty years, a barrier forms in the lens of the eye that decreases intracellular antioxidant transportation. Normally, antioxidants circulate via a current in the cytoplasm of lens fiber cells. However, as the age of the organism increases, the cytoplasm of these cells becomes stiffer. Small molecules such as H2O2 and the superoxide anion can diffuse through, but larger molecules, such as glutathione, cannot enter the barrier. As a result, the core of the lens has a decreased antioxidant concentration, making it more vulnerable to oxidative damage. Furthermore, the amount of protein and mRNA corresponding to important mitochondrial BER enzymes decreases with age, causing a decrease in DNA repair ability and therefore an increase in DNA damage in the mitochondria.  Stohs, 1995; Lee et al., 2004; Martinez et al., 2010; Pendergrass et al., 2010; Zhang et al., 2010; Ainsbury et al., 2016; Tangvarasittichai & Tangvarasittichai, 2018 
H Increased concentration  Decreased level of oxidative DNA damage. Schoenfeld et al., 2012 
Antioxidants  Increased concentration Reviews have found that about 50% of studies examined showed a decrease in base oxidation, but the other half show no change.  Turner et al., 2002; Møller & Loft, 2006; Hoelzl et al., 2009 
Lipoic acid  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 
Acetyl carnitine  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 
Ubiquinone Q-9  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 
Hydroquinone  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 
Folate  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 
Aged garlic extracts  Increased concentration Decreased level of oxidative DNA damage.  Turner et al., 2002 

Domain of Applicability

A free-text section of the KER description that the developers can use to explain their rationale for the taxonomic, life stage, or sex applicability structured terms. More help

This KER is plausible in all life stages, sexes, and organisms with DNA. The majority of the evidence is from in vivo studies conducted in male and female adult mice and rats. No in vitro evidence was found to support the relationship.